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Voltar para Whole genome sequencing of bacterial genomes - tools and applications

Comentários e feedback de alunos de Whole genome sequencing of bacterial genomes - tools and applications da instituição Universidade Técnica da Dinamarca (DTU)

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1,185 classificações

Sobre o curso

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

Melhores avaliações

AP

19 de jul de 2020

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

9 de jun de 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

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151 — 175 de 322 Avaliações para o Whole genome sequencing of bacterial genomes - tools and applications

por Atif A C

2 de set de 2021

It was a great course for beginers like me. Thanks a lot for this.

por Darío A G V

4 de fev de 2021

Very useful course, most of the classes are easily understandable.

por Jutimala P

30 de jun de 2020

indeed a very well explained course on bacterial genome sequencing

por Filippo S

2 de ago de 2021

practical, interesting, the final project/challenge was fantastic

por Neha G

10 de jul de 2020

Detailed course, learned to utilize various bioinformatics tools.

por Kotla S

27 de abr de 2022

Very designed and useful video and nice explanation by DTU staff

por Arthur d M P

30 de jun de 2020

in fact it was a really hard, but i am happy that i have done it

por Dr. S K

19 de mai de 2020

It is really a great experience, I have learnt a lot. Thank you

por Devina B

15 de jan de 2020

Great it was amazingly delivered and straightforward.

Thank you

por Rama V

13 de jan de 2021

Extremely good course on Whole Genome Sequence Analysis Tools

por Vedant G

4 de set de 2020

Excellent course and gained very useful knowledge from tutors

por CHANCHALA A

3 de jul de 2020

Feeling happy to learn all these courses for my future scope

por Hassan

12 de jun de 2019

The Design, of course, is best as per researcher requirement.

por Suramya S

18 de jul de 2022

I thoroughly enjoyed this course and learned a lot as well.

por Adil M

1 de jul de 2019

It was highly informative and interesting. I enjoyed alot

por Sufiyan M

27 de jul de 2021

It was much informative and well prepared and conceptual

por Nagwan G E M

27 de ago de 2020

very useful and intersting course I finshed it in 4 days

por Sylvia D

17 de jan de 2021

very useful bioinformatics course with hand on training

por Marc B F

2 de mai de 2018

The tools provided are very interesting and easy to use

por 劉時詠[Alex]

16 de dez de 2021

p​refect class, with proper training for the students

por julio a a j

15 de mar de 2018

excelente curso me sirvió mucho para mi phD, gracias!

por Blanchard B

8 de mai de 2022

All I expected to learn by following this course.

por Toyin A A

4 de set de 2019

Its quite interesting and technical. i enjoyed it

por Aneezay J

17 de jul de 2022

It is very brilliant experience in coursera.

por Mohamed H A E

19 de abr de 2020

I'm so happy for being one of your learners..